You didn't answer my question before but I will assume you were using a full length die with an expander ball attachment in. If that is not the case, ignore what I am about to write.
When you pull the arm on the press down, the ram goes up and forces the case up in to the die. The already fired case, at this point, has a neck diameter that is larger than the expander ball, so the expander ball slides in without issue. At the top of the stroke (ram at peak height) the case is effectively sized down (depending on how the die is set) body wise and the shoulder set back. The neck is also forced in to the die and effectively sized down. It is sized down less than the desired diameter needed for bullet seating. It is then sized back up again to the desired neck diameter to accept a bullet for seating, by having the expander ball drawn back through it which happens on the up stroke of the handle which forces the ram back down and the expander ball is pulled back out of the case neck, thus sizing it correctly. If you have not lubed the internal bearing surface of the brass neck sufficiently, the expander ball might have experienced significant friction and effectively pulled the shoulder back out a little on the brass.
You could try screwing out the expander ball and just sizing the brass without it in situ to see if you end up with the desired size brass. It would be prudent to compare sized brass without the expander ball, to the brass which you did successfully get to chamber. There might even be a difference there. I don't know but it is worth checking so you can understand the processes and how you interact with your equipment.
For the record, I personally don't use expander balls. I use FL dies without them and then use an expander mandrel to size the necks back up. The difference being that the mandrel is forced down in to the neck in the first instance rather than being forced out from inside the neck, this resulting in less of what i think you might be experiencing. It also works the brass less and seems to realise more consistent neck tension.
That said, you can load perfectly good ammo with a FL die with an expander ball in situ. Just make sure to correctly lube the internal surface of the necks prior to sizing.